Cell Modeling Virtual Workshop 2020
Important message
The version of the software that will be discussed during the workshop is CellOrganizer v2.9.0. CellOrganizer v2.9.0 will be released in the next few days.
Communication
A Slack workspace has been created for your benefit. Before and during the workshop, presenters and TAs will be available to answer questions. Feel free to ask any questions related to CellOrganizer on the #cellorganizer public channel, including but not limited to installation and usage.
To join the Slack workspace visit the live document shared over e-mail.
Feel free to ask questions before the experience starts.
Useful Information
This landing page has useful information about CellOrganizer, such as downloading and installing software needed for the workshop.
Registered participants will receive further updates about the workshop by e-mail.
Pre-requisites
The two products that are going to be highlighted during the workshop are CellOrganizer for Jupyter and CellOrganizer for Galaxy. CellOrganizer for Jupyter runs on Docker and requires the installation of the Docker client. CellOrganizer for Galaxy runs remotely on Bridges.
These are the pre-requisites for these two products
- Docker client. You will need to install the Docker client before you can pull CellOrganizer for Jupyter from DockerHub. Installing the Docker client is beyond the scope of this document. Follow the instructions here to install the client.
- A modern browser. CellOrganizer for Galaxy has been tested in Firefox and Chrome. Should work on any modern browser.
If you have any issues regarding installation please leave a message on the #cellorganizer public channel on Slack.
Useful Links
Description | Link |
---|---|
Cell Modeling Workshop documentation | Click here |
CellOrganizer v2.9.0 source | Click here |
CellOrganizer v2.9.0 documentation | Click here |
Recent Posts
- CellOrganizer v2.10 Released June 22, 2023
- New Release! CellOrganizer v2.9.3 November 17, 2021
- MMBioS 2021 Workshop July 29, 2021
- New Release! CellOrganizer v2.9.2 July 13, 2021
- New Release! CellOrganizer v2.9.1 July 12, 2021