CellOrganizer v2.7.0
Release Highlights
Features
- Included new model class/type constructive_geometry/half-ellipsoid
- Included new model class/type:framework/pca
- Included support for constructing models with OME.TIFF containing regions of interest
Enhancements
- img2slml now checks the combination of model class and type for every submodel before attempting to extract parameters from images
- Added demo3D44 to show how to synthesize from a model class/type constructive_geometry/half-ellipsoid
- Added a battery of unit test for demos using Matlab testing framework
- Added demo3D45 to show how to use OME.TIFF files with ROIs
- Added demo2D05, demo2D06, demo2D07 to show how to train and synthesize from a classtype framework/pca model
Downloads
- CellOrganizer v2.7 Compressed Source Code [484 MB]
- CellOrganizer v2.7 Compressed Source Code + Image Collection [9.2 GB]
Documentation
- To read the documentation online, click here.
Requirements
- Matlab 2016b or newer
- Bioinformatics Toolbox
- Computer Vision System Toolbox
- Control System Toolbox
- Curve Fitting Toolbox
- Image Processing Toolbox
- Mapping Toolbox
- Optimization Toolbox
- Robust Control Toolbox
- Signal Processing Toolbox
- Simulink
- Simulink Design Optimization
- Statistics and Machine Learning Toolbox
- System Identification Toolbox
- Wavelet Toolbox
Validating Suite
CellOrganizer releases for the 2.0 family are continuously tested using a set of
- public tests using the Matlab Unit Testing Framework
- private tests for compatibility with old releases of Matlab
Compatibility
CellOrganizer releases for the 2.0 family have been tested on
- Matlab 2016b/Ubuntu 12.04
- Matlab 2016b/MacOSX El Capitan
Recent Posts
- CellOrganizer v2.10 Released June 22, 2023
- New Release! CellOrganizer v2.9.3 November 17, 2021
- MMBioS 2021 Workshop July 29, 2021
- New Release! CellOrganizer v2.9.2 July 13, 2021
- New Release! CellOrganizer v2.9.1 July 12, 2021