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CellOrganizer v2.5.2

Release Notes

  • Fixed issues with demo3D04 to demo3D07 due to nonexistent field.
  • Centrosome model class and type has been update to reflect refactoring.
  • Adjusted directory path for demo3D20.
  • Updated 2D and 3D demos to match documentation.
  • Fixed error in demo3D15 where synthetic images were empty.

Downloads

  • CellOrganizer v2.5.2 Compressed Source Code [484 MB]
  • CellOrganizer v2.5.2 Compressed Source Code + Image Collection [3.2 GB]

Documentation

  • To read the documentation online, click here.

Requirements

  • Matlab 2014b or newer
  • Image Processing Toolbox for Matlab
  • Statistics and Machine Learning Toolbox/Statistics Toolbox
  • SymBiology Toolbox
  • Curve Fitting Toolbox

Validating Suite

CellOrganizer releases for the 2.0 family are continuously tested using a set of

  • public tests using the Matlab Unit Testing Framework
  • private tests for compatibility with old releases of Matlab

Compatibility

CellOrganizer releases for the 2.0 family have been tested on

  • Matlab 2015a/Ubuntu 12.04
  • Matlab 2014a/Ubuntu 12.04
  • Matlab 2016a/MacOSX El Capitan

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Recent Posts

  • New Release! CellOrganizer v2.9.3 November 17, 2021
  • MMBioS 2021 Workshop July 29, 2021
  • New Release! CellOrganizer v2.9.2 July 13, 2021
  • New Release! CellOrganizer v2.9.1 July 12, 2021
  • New Release! CellOrganizer v2.8.1 June 20, 2019

Contact Us

If you have a question regarding any of the CellOrganizer products, then feel free to send us a message.

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Support for CellOrganizer has been provided by grants GM075205, GM090033 and GM103712 from the National Institute of General Medical Sciences, grants MCB1121919 and MCB1121793 from the U.S. National Science Foundation, by a Forschungspreis from the Alexander von Humboldt Foundation, and by the Freiburg Institute for Advanced Studies.

Copyright © 2007-2020 by the Murphy Lab, Carnegie Mellon University