- Models have been retrained and reflect CellOrganizer updated model structure.
- Demos have been updated to have consistent documentation.
- Issues in 3D diffeomorphic training have been resolved.
- Outputs corrected in demos.
- Some demos were refactored.
- CellOrganizer v2.5.1 Compressed Source Code [483 MB]
- CellOrganizer v2.5.1 Compressed Source Code + Image Collection [3.2 GB]
- To read the documentation online, click here.
- Matlab 2014b or newer
- Image Processing Toolbox for Matlab
- Statistics and Machine Learning Toolbox/Statistics Toolbox
- SymBiology Toolbox
- Curve Fitting Toolbox
CellOrganizer releases for the 2.0 family are continuously tested using a set of
- public tests using the Matlab Unit Testing Framework
- private tests for compatibility with old releases of Matlab
CellOrganizer releases for the 2.0 family have been tested on
- Matlab 2015a/Ubuntu 12.04
- Matlab 2014a/Ubuntu 12.04
- Matlab 2016a/MacOSX El Capitan