CellOrganizer v2.5.1

Release Notes

• Models have been retrained and reflect CellOrganizer updated model structure.
• Demos have been updated to have consistent documentation.
• Issues in 3D diffeomorphic training have been resolved.
• Outputs corrected in demos.
• Some demos were refactored.

Downloads

• CellOrganizer v2.5.1 Compressed Source Code [483 MB]
• CellOrganizer v2.5.1 Compressed Source Code + Image Collection [3.2 GB]

Documentation

• To read the documentation online, click here.

Requirements

• Matlab 2014b or newer
• Image Processing Toolbox for Matlab
• Statistics and Machine Learning Toolbox/Statistics Toolbox
• SymBiology Toolbox
• Curve Fitting Toolbox

Validating Suite

CellOrganizer releases for the 2.0 family are continuously tested using a set of

• public tests using the Matlab Unit Testing Framework
• private tests for compatibility with old releases of Matlab

Compatibility

CellOrganizer releases for the 2.0 family have been tested on

• Matlab 2015a/Ubuntu 12.04
• Matlab 2014a/Ubuntu 12.04
• Matlab 2016a/MacOSX El Capitan