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This table lists all the models that have been officially released with CellOrganizer.
| File name |
Size |
Version |
Dim |
Cell |
Framework |
Framework type |
Pattern(s) |
Pattern class |
Pattern type |
| cell_model_nuc_align.mat |
724Mb |
2.4.0 |
3D |
H1299 |
Cell |
diffeomorphic |
N/A |
N/A |
N/A |
| endosome.mat |
32Kb |
2.1.0 |
2D |
HeLa |
Cell and nucleus |
medial axis and ratio models |
endosomes |
vesicles |
GMM |
| lysosome.mat |
32Kb |
2.1.0 |
2D |
HeLa |
Cell and
nucleus |
medial axis
and ratio models |
lysosomes |
vesicles |
GMM |
| mitochondrion.mat |
32Kb |
2.1.0 |
2D |
HeLa |
Cell and nucleus |
medial axis and ratio models |
mitochondria |
vesicles |
GMM |
| nucleolus.mat |
32Kb |
2.1.0 |
2D |
HeLa |
Cell and
nucleus |
medial axis
and ratio models |
nucleoli |
vesicles |
GMM |
| 3t3_model.mat |
992Kb |
2.1.0 |
3D |
3T3 |
Cell and nucleus |
diffeomorphic |
lysosomes |
vesicles |
GMM |
| centro.mat |
2.0Mb |
2.1.0 |
3D |
HeLa |
Cell and
nucleus |
cylindrical
and ratio |
centrosomes |
vesicles |
GMM |
| hela_model.mat |
5.4Mb |
2.1.0 |
3D |
HeLa |
Cell and nucleus |
cylindrical and ratio |
lysosomes |
vesicles |
GMM |
| lamp2.mat |
2.0Mb |
2.1.0 |
3D |
HeLa |
Cell and
nucleus |
cylindrical
and ratio |
lysosomes |
vesicles |
GMM |
| mit.mat |
2.0Mb |
2.1.0 |
3D |
HeLa |
Cell and nucleus |
cylindrical and ratio |
mitochondria |
vesicles |
GMM |
| nuc.mat |
2.0Mb |
2.1.0 |
3D |
HeLa |
Cell and
nucleus |
cylindrical
and ratio |
nucleoli |
vesicles |
GMM |
| tfr.mat |
2.0Mb |
2.1.0 |
3D |
HeLa |
Cell and nucleus |
cylindrical and ratio |
endosomes |
vesicles |
GMM |
| tub.mat |
2.0Mb |
2.1.0 |
3D |
HeLa |
Cell and
nucleus |
cylindrical
and ratio |
microtubules |
vesicles |
GMM |
| hela_nuc_10_15_15.mat |
71Mb |
2.4.0 |
3D |
HeLa |
Nucleus |
diffeomorphic |
N/A |
N/A |
N/A |
| hela_cell_10_15_15.mat |
75Mb |
2.4.0 |
3D |
HeLa |
Cell |
diffeomorphic |
N/A |
N/A |
N/A |
| helamodel_9_16_15.mat |
72Mb |
2.4.0 |
3D |
HeLa |
Cell and nucleus |
diffeomorphic |
N/A |
N/A |
N/A |
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